BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F03SP1|AL425893
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1099 1451 0.0
>3x_Contig1099
Length = 3902
Score = 1451 bits (722), Expect = 0.0
Identities = 749/769 (97%)
Strand = Plus / Minus
Query: 1 aagttngactcggtattgaaaagttgcgatgattttacacactcttcttgctttttgaag 60
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3687 aagttcgactcggtattgaaaagttgcgatgattttacccactcttcttgctttttgaag 3628
Query: 61 gtagataataacgatgtatattgtaagagttccgtagttttmaaatmatgatcmtcttcc 120
||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||
Sbjct: 3627 gtagataataacgatgtatattgtaagagttccgtagttttcaaatcatgatcctcttcc 3568
Query: 121 tgtgaagatagcmtttctaactgatattcttttaaaaaattgggtaaatcatggttgtma 180
|||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| |
Sbjct: 3567 tgtgaagatagcctttctaactgatattcttttaacaaattgggtacatcatggttgtca 3508
Query: 181 acaaataamtcaagcgcttttactttacmgtttatmaagaagcgcctcgataacgcaatt 240
|||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 3507 acaaataactcaagcgcttttactttaccgtttatcaagaagcgcctcgataacgcaatt 3448
Query: 241 atagtatcaatactatcagtatagagtccgttctcaattagcmattcaacaccattcatt 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3447 atagtatcaatactatcagtatagagtccgttctcaattagccattcaacaccattcatt 3388
Query: 301 aamctttgatccamttcactaamttcgttagtmaamtctatgtvactatmaacaatgtaa 360
|| |||||||||| |||||||| ||||||||| || ||||||| ||||| ||||||||||
Sbjct: 3387 aacctttgatccacttcactaacttcgttagtcaactctatgtcactatcaacaatgtaa 3328
Query: 361 tattgatccgtttcttcaaaaattcgctgagcggttcttctgagtatattagcaatcggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 tattgatccgtttcttcaaaaattcgctgagcggttcttctgagtatattagcaatcggt 3268
Query: 421 aaacccaaatatttggagatttccatttgtttttgtctgagattaggatcaatgagattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 aaacccaaatatttggagatttccatttgtttttgtctgagattaggatcaatgagattg 3208
Query: 481 gtgaggaagaatgaataagtttctacaatttcctcttgtgataagaaactaacaaagact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3207 gtgaggaagaatgaataagtttctacaatttcctcttgtgataagaaactaacaaagact 3148
Query: 541 ggtataacatcgtataacccatagtaggatagtagtgagatgtatgatgttaataatttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 ggtataacatcgtataacccatagtaggatagtagtgagatgtatgatgttaataatttc 3088
Query: 601 gacttatttgaaatgtctatggtatctggtgacacaatatcaaggaatatggttaaattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3087 gacttatttgaaatgtctatggtatctggtgacacaatatcaaggaatatggttaaattt 3028
Query: 661 gtgagaattcttagcaagtacgattcgttgaatagcgcgttgtcttcatctcgcccttta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3027 gtgagaattcttagcaagtacgattcgttgaatagcgcgttgtcttcatctcgcccttta 2968
Query: 721 ataacatccaatagcatatctgtcgatgatttcatgaccggttctatgg 769
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2967 ataacatccaatagcatatctgtcgatgatttcatgaccggttctatgg 2919
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5078
Number of Sequences: 1807
Number of extensions: 5078
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)